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Table 2 Multilocus genotyping of Toxoplasma gondii isolates in animal samples from northern Iran

From: Genetic characterization of Toxoplasma gondii in meat-producing animals in Iran

Isolate ID

Host

Genetic markersa

Toxo-DB genotypeb

SAG1

5′–3′-SAG2

alt-SAG2

SAG3

BTUB

GRA6

C22-8

C29-2

L358

PK1

Apico

CS3

RHc

 

I

I

I

I

I

I

I

I

I

I

I

I

Reference (Type I)

PRUc

 

II

II

II

II

II

II

II

II

II

II

II

II

Reference (Type II)

VEGc

 

III

III

III

III

III

III

III

III

III

III

III

III

Reference (Type III)

TgShIr20

Sheep

II or III

III

III

III

III

III

III

III

III

III

III

III

#2

TgShIr23

Sheep

II

II

II

II

II

II

II

II

II

II

II

II

#1

TgShIr35

Sheep

II

II

II

II

II

II

II

II

II

II

II

II

#1

TgShIr37

Sheep

II

II

II

II

II

II

II

II

II

II

II

II

#1

TgShIr38

Sheep

II

II

II

II

II

II

II

II

II

II

II

II

#1

TgShIr43

Sheep

II

II

II

II

II

II

II

II

II

II

II

II

#1

TgGoIr132

Goat

II or III

III

III

III

III

III

III

III

III

III

III

III

#2

TgShIr168

Sheep

II

II

II

II

II

II

II

NA

II

II

NA

II

#1

TgShIr169

Sheep

II

II

II

II

II

II

II

NA

II

II

NA

II

#1

TgShIr174

Sheep

II or III

III

III

III

III

III

NA

III

III

III

III

III

#2

TgDuIr7

Duck

I

III

III

III

III

III

III

III

III

III

III

III

#48

TgCkIr9

Chicken

II

II

II

II

II

II

II

II

II

II

II

II

#1

TgCkIr26

Chicken

II or III

III

III

III

III

III

III

III

III

III

NA

III

#2

TgCkIr27

Chicken

II or III

III

III

III

III

III

III

III

III

III

III

III

#2

TgCkIr28

Chicken

II or III

III

III

III

III

III

III

III

III

III

III

III

#2

TgCkIr29

Chicken

II

II

II

II

II

II

II

II

II

II

NA

II

#1

TgCkIr30

Chicken

II or III

III

III

III

III

III

III

III

III

III

NA

III

#2

TgCkIr31

Chicken

II or III

III

III

III

III

III

III

III

III

III

III

III

#2

TgCkIr35

Chicken

II or III

III

III

III

III

III

III

III

III

III

III

III

#2

TgCkIr37

Chicken

II or III

III

III

III

III

III

III

III

III

NA

III

III

#2

TgAbIr3

Aborted fetus

II or III

III

III

III

III

III

III

III

III

III

III

III

#2

TgAbIr12

Aborted fetus

II

II

II

II

II

II

NA

II

II

II

NA

II

#1

TgAbIr14

Aborted fetus

I

I

I

I

I

I

I

III

I

I

I

I

#27

TgAbIr16

Aborted fetus

I

I

I

I

I

I

I

I

I

I

I

I

#10

TgAbIr18

Aborted fetus

I

I

I

I

I

I

I

I

I

I

I

I

#10

TgAbIr19

Aborted fetus

I

I

I

I

I

I

I

I

I

NA

I

I

#10

TgAbIr20

Aborted fetus

II

II

II

II

II

II

NA

II

II

II

NA

II

#1

TgAbIr22

Aborted fetus

I

I

I

I

I

I

I

III

I

I

I

I

#27

TgAbIr28

Aborted fetus

II

II

II

II

II

II

II

II

II

II

II

II

#1

TgAbIr30

Aborted fetus

II

II

II

II

II

II

II

II

II

II

II

II

#1

  1. NA No amplification, Toxo-DB genome database for the genus Toxoplasma
  2. aFor details of markers, see [10, 20]
  3. bToxo-DB reference strains: #1 (Type II), #2 (Type III), #10 (Type I), #27 and #48
  4. cParasite reference strains: Type I (RH), Type II (PRU), Type III (VEG)