Fig. 3

Gene function annotation of Paratylenchus projectus. A COG annotation; B Carbohydrate-active enzyme annotation; C KEGG annotation; D GO annotation; E the estimated signal peptides assigned to different functional groups by GO. The numbers on the x-axis in COG annotation represent: (1) RNA processing and modification; (2) chromatin structure and dynamics; (3) energy production and conversion; (4) Cell cycle control, cell division, chromosome partitioning; (5) amino acid transport and metabolism; (6) nucleotide transport and metabolism; (7) carbohydrate transport and metabolism, (8) coenzyme transport and metabolism; (9) lipid transport and metabolism; (10) translation, ribosomal structure and biogenesis; (11) transcription; (12) replication, recombination and repair; (13) cell wall/membrane/envelope biogenesis; (14) cell motility; (15) posttranslational modification, protein turnover, chaperones; (16) inorganic ion transport and metabolism; (17) secondary metabolite biosynthesis, transport and catabolism; (18) general function prediction only; (19) function unknown; (20) signal transduction mechanisms; (21) intracellular trafficking, secretion and vesicular transport; (22) defense mechanisms; (23) extracellular structures; (24) mobilome: prophages, transposons; (25) nuclear structure, (26) cytoskeleton