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Table 1 Prevalence and distribution of Enterocytozoon bieneusi genotypes in wild animals in northwest China

From: Genetic diversity of Enterocytozoon bieneusi in 1099 wild animals and 273 imported pastured donkeys in northern China

Animal

Number of samples obtained and examined

Number of positive samples (%)

Enterocytozoon bieneusi genotype(s) (no. of positive samples)

Genogroup(s) (no. of positive samples)a

Class Mammalia

1019

123 (12.1)

  

Rodentia

610

83 (13.6)

PL14 (n = 42), EbpD (n = 13), XJHT4 (n = 6), D (n = 3), horse1 (n = 18), CHG7 (n = 1)

1 (n = 35), 12 (n = 42), 14 (n = 6)

Lagomorpha

82

1 (1.2)

BEB6 (n = 1)

2 (n = 1)

Soricomorpha

2

0

  

Perissodactyla

273

30 (11.0)

CHG7 (n = 29), horse1 (n = 1)

1 (n = 30)

Even-toed ungulate

7

0

  

Carnivora

39

9 (23.1)

NCF2 (n = 4), NCF6 (n = 3),

D (n = 2)

1 (n = 9)

Erinaceomorpha

5

0

  

Primates

1

0

  

Class Reptilia

131

0

  

Class Aves

232

10 (4.3)

MWC-d1 (n = 2), CHG7 (n = 3), E (n = 1), SN45 (n = 1), horse1 (n = 3)

1 (n = 10)

Anseriformes

48

2 (4.2)

MWC-d1 (n = 2)

1 (n = 2)

Lariformes

98

3 (3.1)

CHG7 (n = 3)

1 (n = 3)

Accipitriformes

20

2 (10.0)

horse1 (n = 1), E (n = 1)

1 (n = 2)

Passeriformes

39

2 (5.1)

SN45 (n = 1), horse1 (n = 1)

1 (n = 2)

Cuculiformes

5

0

  

Columbiformes

8

0

  

Bucerotiformes

3

0

  

Strigiformes

3

1 (33.4)

horse1 (n = 1)

1 (n = 1)

Coraciiformes

1

0

  

Caprimulgiformes

2

0

  

Struthioniformes

3

0

  

Galliformes

1

0

  

Gruiformes

1

0

  

Total

1372

133 (9.7)

PL14 (n = 42), CHG7 (n = 33), horse1 (n = 22), EbpD (n = 13), XJHT4 (n = 6), D (n = 5), NCF2 (n = 4), NCF6 (n = 3), MWC_d1 (n = 2), BEB6 (n = 1), E (n = 1), SN45 (n = 1)

1 (n = 84), 2 (n = 1), 12 (n = 42), 14 (n = 6)

  1. aIn the southwestern and central regions of China, Enterocytozoon bieneusi genotypes have been assigned to 14 major genetic groups, denoted as Group 1 to 14